Projects

Here you can see what I have been working on recently.

Author

Oliver F. Anderson, MS

Keywords

computational biology, bioinformatics, data science, network analysis, algorithms, AI automation, health informatics, biotechnology research

GRPhIN: Graphlet Characterization of Regulatory and Physical Interaction Networks

academic

algorithms

biology

networks

visualization

statistical testing

software engineering

Working in the Ritz Lab at Reed College, we developed an algorithm to enumerate 2- and 3-node graphlets graphlets and their orbits in a mixed interaction networks.

Apr 3, 2025

Oliver F. Anderson

ProteinWeaver: Visualizing Biological Networks in their Functional Context

academic

biology

networks

visualization

databases

data engineering

software engineering

Under the guidance of Dr. Anna Ritz at Reed College and in collaboration with Altaf Barelvi, we developed a webtool that enables user to visualize molecular interaction networks in the context of a particular biological function or process.

Jul 5, 2024

Oliver F. Anderson

Integrating Biology and Code: Developing a Software Pipeline for Plastic Biodegradation

academic

biology

analysis

code

bioinformatics

data wrangling

bash

By combining biology and coding, I developed a software pipeline to analyze RNA-seq data and uncover enzymatic pathways for plastic biodegradation. A step towards a greener future.

May 17, 2022

Oliver F. Anderson

City Vacation Planning Shiny App

interactive

analysis

code

data wrangling

data visualization

shiny (R package)

Leaflet (R package)

plotly (R package)

An interactive app that helps users plan trips to a selection of cities. Made with the shiny, leaflet, and plotly packages in R. For a better viewing experience, check out the full version here.

Apr 23, 2023

Oliver F. Anderson

Illuminating Insights: Exploring Interactive Graphics with `plotly` and `ggiraph`

health

analysis

code

data wrangling

data visualization

Delve into interactive data visualization using plotly and ggiraph in this post. Explore sunshine levels in US cities, analyze intriguing patterns, and uncover potential dream vacation spots.

Feb 16, 2023

Oliver F. Anderson

Super Bowl Champions: Analysis Using the `gt` R Package

sports

analysis

code

data wrangling

data visualization

Explore the Super Bowl champions’ table, highlighting winners, scores, and locations, using the gt R package. Uncover your team’s success!

Feb 13, 2023

Oliver F. Anderson

Creating a Remote Currency Database: Harnessing the Potential of Docker and API Scraping

analysis

code

data wrangling

bash

docker

SQL

web scraping

data engineering

databases

Discover how I created a dynamic currency database in SQL, analyzed GDP growth in R, and uncovered the dollar’s recent strength.

Nov 25, 2022

Oliver F. Anderson

Interactive Map Made with Shiny and Leaflet in R

health & fitness

analysis

code

data wrangling

data visualization

shiny (R package)

Leaflet (R package)

An interactive map of CDC data on nutrition, exercise, and obesity in the United States. Created in partnership with Hayden Vaughn. For a better viewing experience, check out the full version here.

Nov 23, 2022

Oliver F. Anderson

Unveiling Body Compositions in Olympic Track and Field: Exploring Data Trends

health & fitness

analysis

code

data wrangling

data visualization

Visualization of the body composition of the athletes in different track and field events. Data from #TidyTuesday.

Feb 5, 2023

Oliver F. Anderson

Oliver F. Anderson, MS – Computational Biologist, Data Scientist, and Research Consultant based in Portland, Oregon. I design data-driven solutions in bioinformatics, machine learning, and AI automation for research and biotech.

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